De Novo Assembly
De novo and reference-based genome assemblies.
DE NOVO ASSEMBLY
Gain a deep understanding of both: de novo and reference-based genome assemblies.
Potential sources of error can be addressed up front by measuring assembly quality and generation of reliable statistics.
Benefit from our strong connections to world-leading researchers that allow us to develop cutting edge tools and pipelines for assemblies of all genome sizes.
- Chromosome level assemblies: Generation of genome assemblies for even large polyploid genomes.
- Polyploid genomes: Assembling of large, polyploid genomes (so far, up to 22 Gbp in size).
- Genetic variance studies, marker development, and pre-breeding: Get additional resources to apply your de novo assembly results.
Client project: De novo assembly of two indica elite rice lines
We performed a de novo assembly of two indica elite rice lines using Illumina and PacBio data. We constructed a genetic map using 2000 F2 individuals to build pseudochromosome level assemblies with > 95% of the scaffolds in chromosomes and > 99% gene space covered.
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Christian
Computomics Expert on Genome Assembly
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Contact
Tübingen, Germany
Computomics is based in the university town of Tübingen, situated in the Southwest of Germany, from where we serve clients all over the world.
We also have a presence in Madison, Wisconsin and in the Washington, DC area.
Computomics GmbH
Christophstr. 32
72072 Tübingen
Germany
Phone +49 7071 568 3995
info@computomics.com